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Accepted for/Published in: JMIR Bioinformatics and Biotechnology

Date Submitted: Sep 30, 2021
Date Accepted: Apr 27, 2022

The final, peer-reviewed published version of this preprint can be found here:

Identification of a Novel c.3080delC JAG1 Gene Mutation Associated With Alagille Syndrome: Whole Exome Sequencing

Panwar DD, Lal DV, Thatai DA

Identification of a Novel c.3080delC JAG1 Gene Mutation Associated With Alagille Syndrome: Whole Exome Sequencing

JMIR Bioinform Biotech 2022;3(1):e33946

DOI: 10.2196/33946

PMID: 27683065

PMCID: 5041145

Identification of a novel c.3080delC JAG1 gene mutation associated with Alagille syndrome by whole exome sequencing

  • Dr. Deepak Panwar; 
  • Dr. Vandana Lal; 
  • Dr. Atul Thatai

ABSTRACT

Background:

Background:

Alagille syndrome is an autosomal dominant disorder associated with variable clinical phenotypic features including cholestasis, congenital heart defects, vertebral defects and dysmorphic facies.

Objective:

Objectives: Whole-exome sequencing (WES) has become technically feasible due to the recent advances in next-generation sequencing technologies, therefore offering new possibilities for mutations/genes identification.

Methods:

Methods:

Next-generation sequencing (NGS) - Whole-exome sequencing was used to identify pathogenic variants of the proband. In this paper, we have uncovered a novel JAG1 mutation associated with Alagille syndrome in a 5 years old girl presented with conjugated hyperbilirubinemia and infantile cholestasis.

Results:

Results:

The exome sequencing analysis revealed the presence of a novel JAG1 heterozygous c.3080delC variant in exon 25. The detected variant introduce a stop codon (p.P1027RfsTer9) in the gene sequence, encoding a truncated protein. Our exome observations were confirmed through Sanger sequencing as well.

Conclusions:

Conclusions:

Here, we report a case of a patient with conjugated hyperbilirubinemia and infantile cholestasis, with emphasis on its association with the detection of novel JAG1 variant thereby, establishing the genetic diagnosis of the Alagille syndrome.


 Citation

Please cite as:

Panwar DD, Lal DV, Thatai DA

Identification of a Novel c.3080delC JAG1 Gene Mutation Associated With Alagille Syndrome: Whole Exome Sequencing

JMIR Bioinform Biotech 2022;3(1):e33946

DOI: 10.2196/33946

PMID: 27683065

PMCID: 5041145

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