Previously submitted to: JMIR Formative Research (no longer under consideration since May 21, 2026)
Date Submitted: Oct 13, 2025
Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.
Cross-Specialty Analysis of Japanese Perinatal EHR Narratives Using Large Language Models: Documentation Asymmetry and the Classification of Depressive States
ABSTRACT
Background:
The perinatal period is associated with an elevated risk for depressive disorders, making timely identification a public health priority. Collaboration between obstetrics and psychiatry often remains suboptimal in clinical practice. A potential contributor to this gap is information asymmetry across specialties—qualitative and quantitative imbalances in how psychiatric symptoms are documented in electronic health records (EHRs).
Objective:
To quantify cross-specialty asymmetries in perinatal EHR documentation and to evaluate the performance of large language model (LLM)–based approaches for classifying depressive states from heterogeneous clinical narratives.
Methods:
We retrospectively collected Japanese-language EHR notes for 94 pregnant or postpartum patients with a history of psychiatric consultation from a single center. We compared the prevalence of symptom mentions by author specialty. Using stratified sampling, we then selected a cohort of 20 patients to benchmark multiple LLM-based inference pipelines for depressive-state classification. The best-performing pipeline combined LLM outputs with a rule-based layer encoding clinical knowledge for final adjudication.
Results:
Documentation practices differed markedly by clinical specialty. Mentions of “depression” were approximately 30-fold less frequent in notes authored by the obstetrics team compared with those by psychiatrists. Despite this documentation bias, the top-performing pipeline achieved an F1-score of 0.750 (95% CI 0.500–0.917) for classifying depressive states.
Conclusions:
This study highlights the potential of LLMs to classify depressive states from heterogeneous EHRs despite significant documentation asymmetry. However, effective clinical deployment will require both technical advances (eg, bias-aware modeling) and organizational efforts to improve documentation quality and interspecialty information sharing.
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