Maintenance Notice

Due to necessary scheduled maintenance, the JMIR Publications website will be unavailable from Wednesday, July 01, 2020 at 8:00 PM to 10:00 PM EST. We apologize in advance for any inconvenience this may cause you.

Who will be affected?

Accepted for/Published in: JMIR Biomedical Engineering

Date Submitted: Jul 4, 2025
Open Peer Review Period: Jul 5, 2025 - Aug 30, 2025
Date Accepted: Nov 10, 2025
(closed for review but you can still tweet)

The final, peer-reviewed published version of this preprint can be found here:

Noise-Resilient Bioacoustics Feature Extraction Methods and Their Implications on Audio Classification Performance: Systematic Review

Owino G, Shibwabo B

Noise-Resilient Bioacoustics Feature Extraction Methods and Their Implications on Audio Classification Performance: Systematic Review

JMIR Biomed Eng 2025;10:e80089

DOI: 10.2196/80089

PMID: 41401437

PMCID: 12707801

Noise-Resilient Bioacoustics Feature Extraction Methods and Their Implications on Audio Classification Performance: Systematic Review

  • Geofrey Owino; 
  • Bernard Shibwabo

ABSTRACT

Background:

Bioacoustics classification plays a crucial role in wildlife monitoring, ecological assessment, and health diagnostics. However, the presence of environmental noise, signal variability, and limited annotated datasets often hinders model reliability and deployment. Feature extraction and denoising techniques have become critical for improving model robustness, enabling more accurate interpretation of acoustic events across diverse bioacoustics domains.

Objective:

This review aims to systematically examine advancements in noise-resilient feature extraction and denoising techniques used in bioacoustics classification models. Specifically, it explores methodological trends, model types, real-world deployment, and application areas across ecological and health-related domains.

Methods:

A systematic review was conducted by searching eight electronic databases, yielding a total of 5,462 records. Studies were screened for inclusion if they entailed audio-based classification models, applied experimental or computational methods, and reported empirical performance. A total of 132 studies that fit the eligibility criteria were selected for full review by two independent reviewers. Risk of bias was assessed using a customized tool, with 87.9% (n = 116) of studies rated as low risk, 7.6% (n =10) as moderate risk, and 4.5% (n = 6) as high risk. Reporting quality was evaluated using the Transparent Reporting of a multivariable prediction model for Individual Prognosis or Diagnosis (TRIPOD) checklist.

Results:

Out of the 132 included studies, the majority 84.8% (n=112) focused on developing novel classification models, with deep learning and hybrid approaches being the most dominant. Feature extraction played a critical role, with 96.2% (n=127) studies clearly demonstrating feature extraction. MFCCs, spectrograms, and filter bank-based representations were the most common feature representations. Nearly half 47% (n=62) of the studies incorporated noise-resilient methods, such as adaptive deep models, wavelet transforms, and spectral filtering. However, only 14.4% (n=19) demonstrated real-world deployment across healthcare, biodiversity monitoring, and environmental surveillance.

Conclusions:

The integration of advanced deep learning architectures, robust feature engineering techniques and denoising techniques has significantly improved classification accuracy in bioacoustics. Challenges are however present in real-world deployment and proper utilization of denoising strategies in various datasets. Future direction in bioacoustics should focus on deploying noise resilient models into real-world cross domain generalization modules.


 Citation

Please cite as:

Owino G, Shibwabo B

Noise-Resilient Bioacoustics Feature Extraction Methods and Their Implications on Audio Classification Performance: Systematic Review

JMIR Biomed Eng 2025;10:e80089

DOI: 10.2196/80089

PMID: 41401437

PMCID: 12707801

Download PDF


Request queued. Please wait while the file is being generated. It may take some time.

© The authors. All rights reserved. This is a privileged document currently under peer-review/community review (or an accepted/rejected manuscript). Authors have provided JMIR Publications with an exclusive license to publish this preprint on it's website for review and ahead-of-print citation purposes only. While the final peer-reviewed paper may be licensed under a cc-by license on publication, at this stage authors and publisher expressively prohibit redistribution of this draft paper other than for review purposes.