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Accepted for/Published in: JMIR Medical Informatics

Date Submitted: Apr 6, 2025
Open Peer Review Period: Apr 16, 2025 - Jun 11, 2025
Date Accepted: Sep 4, 2025
(closed for review but you can still tweet)

The final, peer-reviewed published version of this preprint can be found here:

Automated Esophageal Cancer Staging From Free-Text Radiology Reports: Large Language Model Evaluation Study

Yao Y, Cen X, Yuan J, Gan L, Jiang J, Wang M, Xu Y

Automated Esophageal Cancer Staging From Free-Text Radiology Reports: Large Language Model Evaluation Study

JMIR Med Inform 2025;13:e75556

DOI: 10.2196/75556

PMID: 41105871

PMCID: 12533932

Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.

Automated Esophageal Cancer Staging from Free-Text Radiology Reports: Large Language Model Evaluation Study

  • Yao Yao; 
  • Xingxing Cen; 
  • Junyi Yuan; 
  • Lu Gan; 
  • Jiehui Jiang; 
  • Min Wang; 
  • Yinghui Xu

ABSTRACT

Background:

Accurate staging of esophageal cancer is crucial for determining prognosis and guiding treatment strategies, but manual interpretation of radiology reports by clinicians is prone to variability and limited accuracy, resulting in reduced staging accuracy. Recent advances in large language models (LLMs) have shown promise in medical applications, but their utility in esophageal cancer staging remains underexplored.

Objective:

To compare the performance of three publicly available LLMs (INF, Qwen2.5-72B, and LLaMA3.1-70B) and clinicians in automated esophageal cancer staging using free-text radiology reports.

Methods:

This retrospective study included 161 patients from Shanghai Chest Hospital who underwent esophageal cancer surgery from May to September 2024. The dataset consisted of 916 Chinese free-text radiology reports. The reference standard was derived from postoperative pathological staging. Three LLMs determined T classification (T1-T4), N classification (N0-N3), and overall staging (I-IV) using three prompting strategies (Zero-shot, Chain-of-thought, and a proposed Interpretable Reasoning method). The McNemar test and Pearson chi-square test were used for comparisons.

Results:

INF combined with Interpretable Reasoning demonstrated superior performance, achieving an accuracy of 58% in overall staging, which significantly outperformed clinicians (37%, P < .001). For T classification, it achieved an F1 score of 0.67, markedly surpassing clinicians (0.43, P < .001). For N classification, it achieved an F1 score of 0.54, significantly exceeding the performance of clinicians (0.42, P < .001). For overall staging, it attained an F1 score of 0.60, significantly outperforming clinicians (0.39, P < .001).

Conclusions:

The findings demonstrate the potential of LLMs to improve the accuracy and reliability of esophageal cancer staging based on radiology reports. LLMs can serve as valuable tools to support clinicians in complex diagnostic tasks when properly adapted.


 Citation

Please cite as:

Yao Y, Cen X, Yuan J, Gan L, Jiang J, Wang M, Xu Y

Automated Esophageal Cancer Staging From Free-Text Radiology Reports: Large Language Model Evaluation Study

JMIR Med Inform 2025;13:e75556

DOI: 10.2196/75556

PMID: 41105871

PMCID: 12533932

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