Maintenance Notice

Due to necessary scheduled maintenance, the JMIR Publications website will be unavailable from Wednesday, July 01, 2020 at 8:00 PM to 10:00 PM EST. We apologize in advance for any inconvenience this may cause you.

Who will be affected?

Accepted for/Published in: JMIR Medical Informatics

Date Submitted: Jan 8, 2025
Open Peer Review Period: Feb 17, 2025 - Apr 14, 2025
Date Accepted: Jun 17, 2025
(closed for review but you can still tweet)

The final, peer-reviewed published version of this preprint can be found here:

Leveraging GPT-4o for Automated Extraction and Categorization of CAD-RADS Features From Free-Text Coronary CT Angiography Reports: Diagnostic Study

Chen Y, Sun J, Dong M, Meng Z, Yang Y, Muhetaier A, Li C, Qin J

Leveraging GPT-4o for Automated Extraction and Categorization of CAD-RADS Features From Free-Text Coronary CT Angiography Reports: Diagnostic Study

JMIR Med Inform 2025;13:e70967

DOI: 10.2196/70967

PMID: 40929727

PMCID: 12422720

Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.

Using GPT-4o for CAD-RADS feature extraction and categorization with free-text coronary CT Angiography reports

  • Youmei Chen; 
  • Jie Sun; 
  • Mengshi Dong; 
  • Zhanao Meng; 
  • Yiqing Yang; 
  • Abudushalamu Muhetaier; 
  • Chao Li; 
  • Jie Qin

ABSTRACT

Background:

Despite the Coronary Artery Reporting and Data System (CAD-RADS) providing a standardized approach, radiologists continue to favor free-text reports. This preference creates significant challenges for data extraction and analysis in longitudinal studies, potentially limiting large-scale research and quality assessment initiatives.

Objective:

To evaluate the ability of the GPT-4o model to convert real-world coronary CT angiography (CCTA) free-text reports into structured data and automatically identify CAD-RADS categories and P Categories.

Methods:

This retrospective study analyzed CCTA reports from January 2024 and July 2024. A subset of 25 reports was used for prompt engineering to instruct the LLMs in extracting CAD-RADS categories, P Categories, the presence of myocardial bridges and non-calcified plaques. Reports were processed using the GPT-4o API and custom Python scripts. The ground truth was established by radiologist based on the CAD-RADS 2.0 guidelines. Model performance was assessed using accuracy, sensitivity, specificity, and F1 score. Intra-rater reliability was assessed using Cohen's Kappa coefficient.

Results:

Among 999 patients (median age 66 years, range 58-74; 650 males), CAD-RADS categorization showed accuracy of 0.98-1.00, sensitivity of 0.95-1.00, specificity of 0.98-1.00, and F1 score of 0.96-1.00. P Categories demonstrated accuracy of 0.97-1.00, sensitivity of 0.90-1.00, specificity of 0.98-1.00, and F1 score of 0.91-0.99. Myocardial bridge detection achieved 0.98 accuracy, and calcified plaque detection showed 0.98 accuracy. Cohen's Kappa values for all classifications exceeded 0.98.

Conclusions:

The GPT-4o model efficiently and accurately converts CCTA free-text reports into structured data, excelling in CAD-RADS classification, plaque burden assessment, and detection of myocardial bridges and calcified plaques.


 Citation

Please cite as:

Chen Y, Sun J, Dong M, Meng Z, Yang Y, Muhetaier A, Li C, Qin J

Leveraging GPT-4o for Automated Extraction and Categorization of CAD-RADS Features From Free-Text Coronary CT Angiography Reports: Diagnostic Study

JMIR Med Inform 2025;13:e70967

DOI: 10.2196/70967

PMID: 40929727

PMCID: 12422720

Download PDF


Request queued. Please wait while the file is being generated. It may take some time.

© The authors. All rights reserved. This is a privileged document currently under peer-review/community review (or an accepted/rejected manuscript). Authors have provided JMIR Publications with an exclusive license to publish this preprint on it's website for review and ahead-of-print citation purposes only. While the final peer-reviewed paper may be licensed under a cc-by license on publication, at this stage authors and publisher expressively prohibit redistribution of this draft paper other than for review purposes.