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Accepted for/Published in: JMIR Aging

Date Submitted: Jul 18, 2024
Open Peer Review Period: Jul 19, 2024 - Sep 13, 2024
Date Accepted: Mar 10, 2025
(closed for review but you can still tweet)

The final, peer-reviewed published version of this preprint can be found here:

Artificial Intelligence-Driven Biological Age Prediction Model Using Comprehensive Health Checkup Data: Development and Validation Study

CHOE EK, Leiby JS, Kim D

Artificial Intelligence-Driven Biological Age Prediction Model Using Comprehensive Health Checkup Data: Development and Validation Study

JMIR Aging 2025;8:e64473

DOI: 10.2196/64473

PMID: 40231591

PMCID: 12007724

Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.

Development of an AI-Driven Biological Age Prediction Model Using Comprehensive Health Check-Up Data

  • EUN KYUNG CHOE; 
  • Jacob S. Leiby; 
  • Dokyoon Kim

ABSTRACT

Background:

The global increase in life expectancy has not been paralleled by a similar rise in healthy life expectancy. Accurate assessment of biological aging is crucial for mitigating diseases and socioeconomic burdens associated with aging. Current biological age prediction models are limited by their reliance on conventional statistical methods and constrained clinical information.

Objective:

This study aims to develop and validate an aging clock model using artificial intelligence, based on comprehensive health check-up data, to predict biological age and assess its clinical relevance.

Methods:

We used data from Koreans who underwent health check-ups at Seoul National University Hospital Gangnam Center and the Korean Genome and Epidemiology Study (KoGES) HEXA data. Our model incorporated 39 clinical factors and employed machine learning algorithms, including linear regression, Elastic Net, LASSO, Ridge regression, Random Forest, Support Vector Machine (SVM), Gradient Boost, and K-nearest Neighbors. Model performance was evaluated using adjusted R-squared and Mean Squared Error (MSE). SHAP analysis was conducted to interpret the model's predictions.

Results:

The SVM model achieved the best performance with an MSE of 9.38 and an R2 of 0.927. SHAP analysis identified significant predictors of biological age, including markers of kidney function, metabolic health, and anthropometric measurements. The predicted biological age showed strong associations with multiple clinical factors, such as pulmonary function, atrophic gastritis, intestinal metaplasia and body compositions.

Conclusions:

Our aging clock model demonstrates high predictive accuracy and clinical relevance, offering a valuable tool for personalized health monitoring and intervention. The model's applicability in routine health check-ups could enhance health management and promote regular health evaluations. Clinical Trial: N/A


 Citation

Please cite as:

CHOE EK, Leiby JS, Kim D

Artificial Intelligence-Driven Biological Age Prediction Model Using Comprehensive Health Checkup Data: Development and Validation Study

JMIR Aging 2025;8:e64473

DOI: 10.2196/64473

PMID: 40231591

PMCID: 12007724

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