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Accepted for/Published in: JMIR Medical Informatics

Date Submitted: May 2, 2022
Date Accepted: Aug 11, 2022

The final, peer-reviewed published version of this preprint can be found here:

A Recurrent Neural Network Model for Predicting Activated Partial Thromboplastin Time After Treatment With Heparin: Retrospective Study

Boie SD, Engelhardt LJ, Coenen N, Giesa N, Rubarth K, Menk M, Balzer F

A Recurrent Neural Network Model for Predicting Activated Partial Thromboplastin Time After Treatment With Heparin: Retrospective Study

JMIR Med Inform 2022;10(10):e39187

DOI: 10.2196/39187

PMID: 36227653

PMCID: 9614623

Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.

A recurrent neural network model predicts activated partial thromboplastin time after treatment with heparin - a retrospective study

  • Sebastian Daniel Boie; 
  • Lilian Jo Engelhardt; 
  • Nicolas Coenen; 
  • Niklas Giesa; 
  • Kerstin Rubarth; 
  • Mario Menk; 
  • Felix Balzer

ABSTRACT

Background:

Anticoagulation therapy with Heparin is a frequent treatment in intensive care units, which is monitored by activated partial thromboplastin clotting time (aPTT). It has been demonstrated that reaching an established anticoagulation target within 24 hours is associated with favorable outcomes. However, patients respond to heparin differently and reaching the anticoagulation target can be challenging. Machine learning algorithms may potentially support clinicians with improved dosing recommendations.

Objective:

This study evaluates a range of machine learning algorithms on their capability of predicting the patients’ response to heparin treatment. In the present analysis, we apply, for the first time, a model that considers time series.

Methods:

We extracted patient demographics, laboratory values, dialysis and ecmo treatments, and scores from the hospital information system. We set up a regression task for predicting the aPTT laboratory values 24 hours after continuous heparin infusion and evaluate seven different machine learning models. We consider all data before and within the first 12 hours of continuous heparin infusion as features and predict the aPTT value after 24 hours.

Results:

The distribution of aPTT in our cohort of 5926 hospital admissions is highly skewed. While most patients show aPTT values below 75 s, some outliers show much higher aPTT values. A recurrent neural network that consumes time series of features shows the highest performance on the test set.

Conclusions:

A recurrent neural network that uses time series of features instead of only static and aggregated features, shows the highest performance of predicting aPTT after heparin treatment.


 Citation

Please cite as:

Boie SD, Engelhardt LJ, Coenen N, Giesa N, Rubarth K, Menk M, Balzer F

A Recurrent Neural Network Model for Predicting Activated Partial Thromboplastin Time After Treatment With Heparin: Retrospective Study

JMIR Med Inform 2022;10(10):e39187

DOI: 10.2196/39187

PMID: 36227653

PMCID: 9614623

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