Maintenance Notice

Due to necessary scheduled maintenance, the JMIR Publications website will be unavailable from Wednesday, July 01, 2020 at 8:00 PM to 10:00 PM EST. We apologize in advance for any inconvenience this may cause you.

Who will be affected?

Accepted for/Published in: JMIR Medical Informatics

Date Submitted: May 18, 2021
Date Accepted: Dec 4, 2021

The final, peer-reviewed published version of this preprint can be found here:

Disease Progression of Hypertrophic Cardiomyopathy: Modeling Using Machine Learning

Pičulin M, Smole T, Žunkovič B, Kokalj E, Robnik-Šikonja M, Kukar M, Fotiadis DI, Pezoulas VC, Tachos NS, Barlocco F, Mazzarotto F, Popović D, Maier LS, Velicki L, Olivotto I, MacGowan GA, Jakovljević DG, Filipović N, Bosnić Z

Disease Progression of Hypertrophic Cardiomyopathy: Modeling Using Machine Learning

JMIR Med Inform 2022;10(2):e30483

DOI: 10.2196/30483

PMID: 35107432

PMCID: 8851344

Disease progression of hypertrophic cardiomyopathy: Modeling using machine learning

  • Matej Pičulin; 
  • Tim Smole; 
  • Bojan Žunkovič; 
  • Enja Kokalj; 
  • Marko Robnik-Šikonja; 
  • Matjaž Kukar; 
  • Dimitrios I Fotiadis; 
  • Vasileios C Pezoulas; 
  • Nikolaos S Tachos; 
  • Fausto Barlocco; 
  • Francesco Mazzarotto; 
  • Dejana Popović; 
  • Lars S Maier; 
  • Lazar Velicki; 
  • Iacopo Olivotto; 
  • Guy A MacGowan; 
  • Djordje G Jakovljević; 
  • Nenad Filipović; 
  • Zoran Bosnić

ABSTRACT

Background:

Cardiovascular disorders in general are responsible for 30% of deaths worldwide. Among them, hypertrophic cardiomyopathy (HCM) is a genetic cardiac disease that is present in about 1 out of 500 young adults and can cause sudden cardiac death (SCD).

Objective:

Although the current state-of-the-art methods model the risk of SCD for patients, to our knowledge no methods are available for modeling the patient's clinical status up to 10 years ahead. In this paper, we propose a novel ML-based tool for predicting disease progression for patients diagnosed with HCM in terms of adverse remodeling of heart during a 10-year period.

Methods:

The method consists of six predictive regression models that independently predict future values of six clinical characteristics: left atrial size, left atrial volume, left ventricular ejection fraction, New York Heart Association Functional Classification (NYHA), left ventricular internal diastolic diameter, and left ventricular internal systolic diameter. We supplemented each prediction with the explanation that is generated with the Shapely additive explanation (SHAP) method.

Results:

The final experiments show that predictive error is lower on 5 out of 6 constructed models with comparison to experts or consortium of experts. The experiments revealed that semi-supervised learning and the artificial data from virtual patients helped to achieve even higher predictive accuracies.

Conclusions:

By engaging medical experts to provide interpretation and validation of the results, we determined the models' favorable performance compared to performance of experts for five out of six targets.


 Citation

Please cite as:

Pičulin M, Smole T, Žunkovič B, Kokalj E, Robnik-Šikonja M, Kukar M, Fotiadis DI, Pezoulas VC, Tachos NS, Barlocco F, Mazzarotto F, Popović D, Maier LS, Velicki L, Olivotto I, MacGowan GA, Jakovljević DG, Filipović N, Bosnić Z

Disease Progression of Hypertrophic Cardiomyopathy: Modeling Using Machine Learning

JMIR Med Inform 2022;10(2):e30483

DOI: 10.2196/30483

PMID: 35107432

PMCID: 8851344

Download PDF


Request queued. Please wait while the file is being generated. It may take some time.

© The authors. All rights reserved. This is a privileged document currently under peer-review/community review (or an accepted/rejected manuscript). Authors have provided JMIR Publications with an exclusive license to publish this preprint on it's website for review and ahead-of-print citation purposes only. While the final peer-reviewed paper may be licensed under a cc-by license on publication, at this stage authors and publisher expressively prohibit redistribution of this draft paper other than for review purposes.