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Previously submitted to: Journal of Medical Internet Research (no longer under consideration since Apr 26, 2020)

Date Submitted: Dec 4, 2019
(closed for review but you can still tweet)

Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.

Development of machine learning model to predict the risk of 5- year disease related outcomes in patients with inflammatory bowel disease

  • Youn I Choi; 
  • Sung Jin Park; 
  • Yoon Jae Kim; 
  • Kwang Gi Kim; 
  • Dong Kyun Park; 
  • Jun-Won Chung; 
  • Kyoung Oh Kim; 
  • Jae Hee Cho; 
  • Young Jae Kim; 
  • Kang Yoon Lee

ABSTRACT

Background:

The incidence and global burden of inflammatory bowel disease (IBD) have steadily increased in the past few decades. Improved methods to stratify risk and predict disease-related outcomes are required for IBD.

Objective:

The aim of this study was to develop and validate a machine learning (ML) model to predict the 5-year risk of starting biologic agents in IBD patients.

Methods:

We applied an ML method to the database of the Korean common data model (K-CDM) network, a data sharing consortium of tertiary centers in Korea, to develop a model to predict the 5-year risk of starting biologic agents in IBD patients. The records analyzed were those of patients diagnosed with IBD between January 2006 and June 2017 at Gil Medical Center (GMC; n = 1,299) or present in the K-CDM network (n = 3,286). The ML algorithm was developed using data from GMC and externally validated with the K-CDM network database.

Results:

The ML model for prediction of IBD-related outcomes at 5 years after diagnosis yielded an area under the curve (AUC) of 0.86 (95% CI: 0.82–0.92), in an internal validation study carried out at GMC. The model performed consistently across a range of other datasets, including that of the K-CDM network (AUC = 0.81; 95% CI: 0.80–0.85), in an external validation study.

Conclusions:

The ML-based prediction model can be used to identify IBD-related outcomes in patients at risk, enabling physicians to perform close follow-up based on the patient’s risk level, estimated through the ML algorithm.


 Citation

Please cite as:

Choi YI, Park SJ, Kim YJ, Kim KG, Park DK, Chung JW, Kim KO, Cho JH, Kim YJ, Lee KY

Development of machine learning model to predict the risk of 5- year disease related outcomes in patients with inflammatory bowel disease

JMIR Preprints. 04/12/2019:17304

URL: https://preprints.jmir.org/preprint/17304

Per the author's request the PDF is not available.