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Currently submitted to: Journal of Medical Internet Research

Date Submitted: Aug 17, 2026
Open Peer Review Period: Aug 18, 2026 - Oct 13, 2026
(currently open for review)

Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.

A Rapid, Reproducible AI-Assisted Workflow for Generating Course-Aligned Anki Decks in Biomedical Sciences Education: A Tutorial

  • Martin Matov; 
  • Marsha DeSmet

ABSTRACT

Background:

The Marian University Biomedical Science (BMS) Master’s program is an intensive graduate-level program designed to mimic the rigor of the first year of medical school. This requires students to implement self-directed strategies to manage cognitive load and support retention. Anki is a digital flashcard program that enables spaced repetition and active recall, but manual flashcard generation is time consuming. Here we describe a reproducible workflow using ChatGPT 5.2 to generate Anki decks aligned to course objectives and lecture content.

Objective:

To describe and demonstrate a reproducible AI-assisted workflow for rapidly generating course-aligned Anki decks from instructor-provided lecture materials in medical sciences education curriculum.

Methods:

Lecture slides were downloaded as editable PowerPoint files and modified during class to remove identifying information, delete non-testable information, clarify key points, and condense extra content. After lecture, edited slides were exported as a PDF and provided to a ChatGPT 5.2 Thinking session with a lecture-specific prompt. ChatGPT generated two import-ready CSV files per lecture, which were imported into Anki.

Results:

Across six completed examination blocks, 17,222 total Anki cards were generated from BMS coursework. Mean deck size was 106 cards per lecture. Cards comprised 56% Basic (9,644) and 44% Cloze (7,578). Deck generation required ~3-5 minutes per lecture, and >99% of cards were retained in the decks with only minor edits for clarity or focus

Conclusions:

This AI-assisted workflow functions as a scalable learner-support tool to rapidly produce high-yield, objective-aligned Anki decks in an accelerated graduate curriculum, enabling immediate post-lecture studying and recall practice customizable to course content and individual student needs. To our knowledge, this represents one of the largest implementations of AI-assisted flashcard generation within medical curriculum.


 Citation

Please cite as:

Matov M, DeSmet M

A Rapid, Reproducible AI-Assisted Workflow for Generating Course-Aligned Anki Decks in Biomedical Sciences Education: A Tutorial

JMIR Preprints. 17/08/2026:109815

DOI: 10.2196/preprints.109815

URL: https://preprints.jmir.org/preprint/109815

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