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Accepted for/Published in: JMIR AI

Date Submitted: Nov 9, 2023
Open Peer Review Period: Nov 9, 2023 - Feb 2, 2024
Date Accepted: Mar 30, 2024
(closed for review but you can still tweet)

The final, peer-reviewed published version of this preprint can be found here:

Near Real-Time Syndromic Surveillance of Emergency Department Triage Texts Using Natural Language Processing: Case Study in Febrile Convulsion Detection

Khademi S, Palmer C, Javed M, Dimaguila GL, Clothier H, Buttery J, Black J

Near Real-Time Syndromic Surveillance of Emergency Department Triage Texts Using Natural Language Processing: Case Study in Febrile Convulsion Detection

JMIR AI 2024;3:e54449

DOI: 10.2196/54449

PMID: 39213519

PMCID: 11399745

Warning: This is an author submission that is not peer-reviewed or edited. Preprints - unless they show as "accepted" - should not be relied on to guide clinical practice or health-related behavior and should not be reported in news media as established information.

Near-real time syndromic surveillance of Emergency Department triage text: A Natural Language Processing (NLP) approach

  • Sedigh Khademi; 
  • Christopher Palmer; 
  • Muhammad Javed; 
  • Gerardo Luis Dimaguila; 
  • Hazel Clothier; 
  • Jim Buttery; 
  • Jim Black

ABSTRACT

Background:

Collecting information on adverse events following immunization from as many sources as possible is critical for prompt identification of any potential safety concerns, so that appropriate actions can be taken. Febrile convulsions are recognized as an important potential reaction to vaccination in children under the age of 6.

Objective:

The primary aim of this study is to evaluate natural language processing (NLP) techniques and machine learning models for the rapid detection of febrile convulsion presentations in emergency departments Additionally, we examine the deployment requirements for a machine learning model to perform real-time monitoring of emergency department triage notes.

Methods:

We developed a pattern matching approach as a baseline and evaluated several machine learning models for the classification of febrile convulsions in emergency department (ED triage notes, to determine both their training requirements and their effectiveness in detecting febrile convulsions. We measured their performance during training and then compared the deployed models’ result on new incoming ED data.

Results:

Although the best standard neural networks had acceptable performance and were low resource models, transformer-based models outperformed them significantly, justifying their ongoing deployment.

Conclusions:

Employing NLP, particularly with the utilization of large language models, offers significant advantages in syndromic surveillance. Large language models make highly effective classifiers, and their text generation capacity can be used to enhance the quality and diversity of training data.


 Citation

Please cite as:

Khademi S, Palmer C, Javed M, Dimaguila GL, Clothier H, Buttery J, Black J

Near Real-Time Syndromic Surveillance of Emergency Department Triage Texts Using Natural Language Processing: Case Study in Febrile Convulsion Detection

JMIR AI 2024;3:e54449

DOI: 10.2196/54449

PMID: 39213519

PMCID: 11399745

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