Maintenance Notice

Due to necessary scheduled maintenance, the JMIR Publications website will be unavailable from Wednesday, July 01, 2020 at 8:00 PM to 10:00 PM EST. We apologize in advance for any inconvenience this may cause you.

Who will be affected?

Accepted for/Published in: JMIR Public Health and Surveillance

Date Submitted: Sep 7, 2018
Open Peer Review Period: Sep 7, 2018 - Sep 15, 2018
Date Accepted: Jan 25, 2019
(closed for review but you can still tweet)

The final, peer-reviewed published version of this preprint can be found here:

Analytics for Investigation of Disease Outbreaks: Web-Based Analytics Facilitating Situational Awareness in Unfolding Disease Outbreaks

Velappan N, Daughton AR, Fairchild G, Rosenberger WE, Generous N, Chitanvis ME, Altherr FM, Castro LA, Priedhorsky R, Abeyta EL, Naranjo LA, Hollander AD, Vuyisich G, Lillo AM, Cloyd EK, Vaidya AR, Deshpande A

Analytics for Investigation of Disease Outbreaks: Web-Based Analytics Facilitating Situational Awareness in Unfolding Disease Outbreaks

JMIR Public Health Surveill 2019;5(1):e12032

DOI: 10.2196/12032

PMID: 30801254

PMCID: 6409513

Analytics for Investigation of Disease Outbreaks (AIDO) – A web-based analytic facilitating situational awareness in unfolding disease outbreaks

  • Nileena Velappan; 
  • Ashlynn Rae Daughton; 
  • Geoffrey Fairchild; 
  • William Earl Rosenberger; 
  • Nicholas Generous; 
  • Maneesha Elizabeth Chitanvis; 
  • Forest Michael Altherr; 
  • Lauren A. Castro; 
  • Reid Priedhorsky; 
  • Esteban Luis Abeyta; 
  • Leslie A. Naranjo; 
  • Attelia Dawn Hollander; 
  • Grace Vuyisich; 
  • Antonietta Maria Lillo; 
  • Emily Kathryn Cloyd; 
  • Ashvini Rajendra Vaidya; 
  • Alina Deshpande

ABSTRACT

Background:

Information from historical infectious disease outbreaks provides real-world data about outbreaks and its impacts on affected populations. These data can be used to develop a picture of an unfolding outbreak in its early stages when incoming information is sparse and isolated, in order to identify effective control measures and guide their implementation.

Objective:

To develop a web-based visual analytic called Analytics for the Investigation of Disease Outbreaks (AIDO), available at https://aido.bsvgateway.org that uses historical outbreak information for decision support and situational awareness of an unfolding outbreak.

Methods:

We developed an algorithm to allow the matching of unfolding outbreak data to a representative library of historical outbreaks. This process provides epidemiological clues that facilitate a user’s understanding of an unfolding outbreak and facilitates informed decisions about mitigation actions. Disease-specific properties to build a complete picture of the unfolding event were identified through a data-driven approach. A method of analogs approach was used to develop a short-term forecasting feature in the analytic. The four major steps involved in developing this tool were 1) collection of historic outbreak data and preparation of the representative library, 2) development of AIDO algorithms, 3) development of user interface & associated visuals, and 4) verification & validation.

Results:

The tool currently includes representative historical outbreaks for 39 infectious diseases with over 600 diverse outbreaks. AIDO uses a variety of analytics to compare user data to historical outbreaks and provide situational awareness. These include a similarity algorithm, short-term forecasting, and anomalous event detection. The web-interface also facilitates outbreak comparison, browsing the library, and related outbreaks with additional visuals/functionalities.

Conclusions:

AIDO is a decision support tool that facilitates increased situational awareness during an unfolding outbreak and enables informed decisions on mitigation strategies. AIDO is valuable to epidemiologists, especially those in resource-poor regions of the world due to the ease of access and no-cost. We present a new approach to applying historical outbreak data to provide actionable information during the early stages of an unfolding infectious disease outbreak.


 Citation

Please cite as:

Velappan N, Daughton AR, Fairchild G, Rosenberger WE, Generous N, Chitanvis ME, Altherr FM, Castro LA, Priedhorsky R, Abeyta EL, Naranjo LA, Hollander AD, Vuyisich G, Lillo AM, Cloyd EK, Vaidya AR, Deshpande A

Analytics for Investigation of Disease Outbreaks: Web-Based Analytics Facilitating Situational Awareness in Unfolding Disease Outbreaks

JMIR Public Health Surveill 2019;5(1):e12032

DOI: 10.2196/12032

PMID: 30801254

PMCID: 6409513

Per the author's request the PDF is not available.

© The authors. All rights reserved. This is a privileged document currently under peer-review/community review (or an accepted/rejected manuscript). Authors have provided JMIR Publications with an exclusive license to publish this preprint on it's website for review and ahead-of-print citation purposes only. While the final peer-reviewed paper may be licensed under a cc-by license on publication, at this stage authors and publisher expressively prohibit redistribution of this draft paper other than for review purposes.